Frequently Asked Questions

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What is the Cell Ranger Multi Pipeline?

Cell Ranger (v9.0.1) multi is a set of analysis pipelines that process Chromium single-cell RNA-seq output to align reads, generate feature-barcode matrices and perform clustering and gene expression analysis.

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Cell Ranger (v9.0.1) multi is a set of analysis pipelines that process Chromium single-cell RNA-seq output to align reads, generate feature-barcode matrices and perform clustering and gene expression analysis.

What is the Variant Calling Pipeline?

This Gatk4 pipeline is intended for calling variants in samples that are clonal – i.e. a single individual.

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This Gatk4 pipeline is intended for calling variants in samples that are clonal – i.e. a single individual.

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