The Pipeline
Deployment Checklist
13 Steps to Launch Your Pipelines the Right Way
13 Steps to Launch Your Pipelines the Right Way

Deploying it reproducibly – handling containerization, resource scheduling, and validation – is often where research bottlenecks truly begin.
In this guide, we distill years of computational biology experience into a practical framework. We explore the essential steps to transition from manual processing to robust deployment, ensuring your pipelines run reliably every time.
Download the checklist to discover how to:
Structure experimental metadata effectively to connect biological design with computational analysis
Eliminate dependency hell by mastering containerization and environment management strategies.
Optimize compute resources for cost and performance across local, cluster, and cloud environments.
Ensure total reproducibility by standardizing tool versions, parameters, and reference assets.