What is Meta-CAMP?

The MetaSUB Core Modular Analysis Pipeline, the CAMP, is a software toolkit designed for dynamic and educational analyses of metagenomes, bacterial isolates, and, in general, all things microbial. It is the primary analytic workflow for the MetaSUB Consortium. The core philosophy of the CAMP is anchored in modularity, which is meant to stand in stark contrast to the popular bioinformatic toolkits of "one-click pipelines." By defining every step in an analytic workflow as single, consistently documented and parameterized codebase, we aim to enable users to gain total control over and a deep understand of their bioinformatic analyses.